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Library Manager

Reference management, citation organization, and Zotero integration

Library Manager

The Library Manager is your central hub for organizing, enhancing, and managing all the references you'll use across your systematic reviews. With intelligent tools and seamless integrations with popular reference managers, it eliminates the friction between literature searching and evidence synthesis.

Whether you're importing thousands of references from database searches or building a curated collection for a specific review, the Library Manager provides the organizational infrastructure you need.


Getting References Into EvidAI

Import Methods

EvidAI supports multiple ways to build your reference library:

MethodBest ForHow It Works
Database ExportBulk imports from searchesUpload RIS, BibTeX, or EndNote XML files
Direct SearchFinding specific papersSearch PubMed, OpenAlex, or other sources directly
DOI/PMID LookupAdding known papersEnter identifiers for automatic metadata retrieval
Reference Manager SyncExisting librariesConnect Zotero for two-way synchronization
Manual EntryGrey literature, reportsCreate reference records manually

Supported File Formats

FormatImportExportNotes
RISUniversal format, works with most reference managers
BibTeXCommon in computer science and engineering
EndNote XMLRich metadata support
PubMed XMLDirect export from PubMed searches
CSVCustom column mapping available
Word BibliographyGenerate formatted reference lists

Organizing Your References

Folders and Collections

The Library Manager uses a flexible organizational system:

Hierarchical Folders — Create nested folder structures to organize by project, topic, or any other scheme. For example:

  • 📁 Diabetes Reviews
    • 📁 SGLT2 Inhibitors
    • 📁 GLP-1 Agonists
    • 📁 Insulin Therapy

Multiple Collection Membership — A single reference can belong to multiple collections. This is useful when a paper is relevant to multiple reviews or topics.

Smart Collections — Create dynamic collections based on saved search criteria. For example, a smart collection for "All RCTs from 2020-2024" automatically updates as you add new references.

Tags — Apply custom tags for flexible categorization that crosses folder boundaries.

Duplicate Detection

Duplicate references are a common problem when combining searches from multiple databases. EvidAI detects duplicates using multiple methods:

  • DOI/PMID matching — Exact identifier matches (most reliable)
  • Fuzzy title matching — Catches duplicates with slight title variations
  • Author/year matching — Secondary confirmation for ambiguous cases

When duplicates are detected, you can merge them while keeping the most complete metadata from each source.


Reference Details

Each reference in your library contains comprehensive metadata that you can view and edit:

Field CategoryIncluded Information
BibliographicTitle, authors, journal, year, volume, pages, DOI
AbstractFull abstract text (auto-retrieved if missing)
KeywordsAuthor keywords and MeSH terms
NotesYour annotations and comments
AttachmentsPDF full-text, supplementary materials
LinksURLs to publisher page, PubMed, etc.

AI-Powered Enhancement

Automatic Metadata Enrichment

The AI automatically fills in missing information by querying academic databases:

  • Missing abstracts retrieved from PubMed, CrossRef, or publisher APIs
  • Author affiliations added from OpenAlex or institutional databases
  • Journal metrics including impact factor and quartile rankings
  • Open access status identifying freely available versions
  • DOI resolution for references missing persistent identifiers

Smart Suggestions

Beyond data completion, the AI provides intelligent recommendations:

Related Papers — "Based on this reference, you might also want to include these 5 highly-cited papers on the same topic."

Missing References — "Your collection doesn't include [seminal paper], which is cited by 80% of the papers you've included."

Citation Network Analysis — Visualize how your references cite each other and identify influential papers.


Zotero Integration

For researchers who already use Zotero, EvidAI offers seamless two-way synchronization.

Setting Up Zotero Sync

  1. Navigate to Settings > Integrations in EvidAI
  2. Click Connect Zotero to begin authorization
  3. Log in to your Zotero account and approve the connection
  4. Select which Zotero collections to sync
  5. Choose sync frequency (real-time, hourly, or manual)

What Syncs

ContentZotero → EvidAIEvidAI → Zotero
Reference Metadata
PDFs
Tags
Notes
Collections

Tip: Set up automatic sync to ensure your libraries stay in sync. Changes made in either system will propagate to the other within your chosen sync interval.


PDF Management

Getting PDFs

EvidAI provides multiple options for obtaining full-text PDFs:

  • Direct upload — Drag and drop PDFs into the interface
  • Auto-retrieval — Automatically download from open access sources
  • Link to storage — Connect to your institutional repository or cloud storage
  • Zotero sync — Import PDFs from your linked Zotero library

Working with PDFs

Once PDFs are in your library:

FeatureDescription
Full-text searchSearch across all PDF content
AnnotationsHighlight and annotate directly in the viewer
Highlight extractionPull highlighted text into your notes
Citation linkingReferences in PDFs link to your library

Search and Filter

Quick Search

The search bar at the top of the Library Manager searches across all fields simultaneously — titles, authors, abstracts, full text (if indexed), tags, and notes.

Advanced Filters

For more precise results, use the filter panel:

FilterOptions
Publication YearRange selector (e.g., 2018-2024)
Study TypeRCT, Cohort, Case-control, etc.
TagsAny of, All of, None of
CollectionSpecific folder membership
Review StatusNot started, In progress, Completed
Has PDFYes, No

Filters can be combined and saved as Smart Collections for reuse.


Collaboration (Enterprise)

For teams working on collaborative reviews, the Library Manager supports shared libraries:

  • Shared Collections — Create collections that multiple team members can access
  • Permission Controls — Set view/edit permissions at the collection level
  • Activity Tracking — See who added, modified, or annotated references
  • Conflict Resolution — Handle simultaneous edits gracefully

Exporting to Evidence Studio

When you're ready to begin screening and extraction, send references to Evidence Studio:

  1. Select the references you want to include (or select all in a collection)
  2. Click Send to Evidence Studio
  3. Choose Create New Review or Add to Existing Review
  4. PDFs and metadata transfer automatically
  5. Begin your systematic review workflow

All metadata, PDFs, and notes carry over to your review, ensuring no work is duplicated.

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